halophFGD

Basic Information

Locus ID: gene-QYE76_056154

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: DnaJ molecular chaperone homology domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	278045072	278054760	-	gene-QYE76_056154

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.41	93,950.66 Da	41.28	72.56	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14223	gag-polypeptide of LTR copia-type	109	239	7.8E-16	-
Pfam	PF00098	Zinc knuckle	290	305	4.7E-4	IPR001878
Pfam	PF03732	Retrotransposon gag protein	464	557	3.2E-11	IPR005162
SUPERFAMILY	SSF57756	Retrovirus zinc finger-like domains	280	309	7.85E-8	IPR036875
Gene3D	G3DSA:4.10.60.10	-	257	323	3.2E-7	-
SMART	SM00343	c2hcfinal6	289	305	0.0048	IPR001878
ProSiteProfiles	PS50158	Zinc finger CCHC-type profile.	290	305	9.059338	IPR001878
MobiDBLite	mobidb-lite	consensus disorder prediction	663	678	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	694	709	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	258	274	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	328	351	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	663	743	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	710	743	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	258	284	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	321	354	-	-

Gene Ontology

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K18626 (trichohyalin)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051199985.1	uncharacterized protein LOC127313537 [Lolium perenne]	0
TrEMBL	A0A453I8F0	CCHC-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	77	gene-QYE76_000700, gene-QYE76_000963, gene-QYE76_001054 ... gene-QYE76_002156, gene-QYE76_002421, gene-QYE76_002536, gene-QYE76_002674, gene-QYE76_002898, gene-QYE76_003810, gene-QYE76_009902, gene-QYE76_009972, gene-QYE76_010249, gene-QYE76_011923, gene-QYE76_012527, gene-QYE76_012573, gene-QYE76_012827, gene-QYE76_013933, gene-QYE76_015865, gene-QYE76_019560, gene-QYE76_021137, gene-QYE76_022857, gene-QYE76_024219, gene-QYE76_024421, gene-QYE76_024666, gene-QYE76_026189, gene-QYE76_026948, gene-QYE76_029594, gene-QYE76_029599, gene-QYE76_029788, gene-QYE76_029996, gene-QYE76_030140, gene-QYE76_031218, gene-QYE76_031311, gene-QYE76_032317, gene-QYE76_032628, gene-QYE76_032726, gene-QYE76_033624, gene-QYE76_035689, gene-QYE76_035710, gene-QYE76_037188, gene-QYE76_038975, gene-QYE76_039501, gene-QYE76_040156, gene-QYE76_040867, gene-QYE76_041475, gene-QYE76_041643, gene-QYE76_041929, gene-QYE76_042380, gene-QYE76_042624, gene-QYE76_042875, gene-QYE76_049733, gene-QYE76_050326, gene-QYE76_050427, gene-QYE76_050768, gene-QYE76_051136, gene-QYE76_051594, gene-QYE76_052903, gene-QYE76_053291, gene-QYE76_053376, gene-QYE76_054128, gene-QYE76_054129, gene-QYE76_054913, gene-QYE76_054957, gene-QYE76_054971, gene-QYE76_056154, gene-QYE76_056909, gene-QYE76_059498, gene-QYE76_060289, gene-QYE76_062070, gene-QYE76_062973, gene-QYE76_063559, gene-QYE76_064167, gene-QYE76_065044, gene-QYE76_066571, gene-QYE76_067098, gene-QYE76_068891, gene-QYE76_069645