Basic Information
Locus ID:
gene-QYE76_055442
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
FBD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 256587180 | 256588965 | + | gene-QYE76_055442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 58,202.44 Da | 45.16 | 96.04 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 99 | 133 | 9.4E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 193 | 321 | 3.77E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 95 | 146 | 2.09E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 98 | 136 | 5.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 516 | 5.9E-8 | IPR032675 |
| SMART | SM00256 | fbox_2 | 100 | 140 | 2.5E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 94 | 134 | 9.523964 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051226883.1 | F-box/FBD/LRR-repeat protein At1g13570-like [Lolium perenne] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PTC5 | F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH02.3059, AH02.3061, AH06.1307, BH02.3141, BH02.3142 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0031990, gene-QOZ80_1BG0082200 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0286570.1, HORVU.MOREX.r3.3HG0286590.1 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_055442, gene-QYE76_055443, gene-QYE76_055444 ... |
| Poaceae | Oryza coarctata | 3 | Oco01G019960, Oco01G019970, Oco02G019800 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g52970.1, LOC_Os01g52980.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G264700 |
| Poaceae | Puccinellia tenuiflora | 7 | Pt_Chr0505500, Pt_Chr0506047, Pt_Chr0506051, Pt_Chr0602100 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G010550, Chr03G015420, Chr05G022840, Chr08G015490 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G464000, Tel3E01G464100 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3AG041760, gene_TRIDC3AG041770 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS3A02G282200.1, TraesCS3A02G282300.1 ... |