Basic Information
Locus ID:
gene-QYE76_055368
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DYW family of nucleic acid deaminases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 254529321 | 254532409 | - | gene-QYE76_055368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 98,493.51 Da | 42.74 | 55.34 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14432 | DYW family of nucleic acid deaminases | 767 | 887 | 4.7E-38 | IPR032867 |
| Pfam | PF01535 | PPR repeat | 605 | 631 | 5.5E-5 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 677 | 700 | 0.23 | IPR002885 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 505 | 655 | 1.9E-23 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 605 | 637 | 5.1E-5 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 602 | 636 | 10.764054 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 367 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25580.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_051225915.1 | pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Lolium perenne] | 0 |
| Q680H3 | Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453FFW9 | DYW_deaminase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology