Basic Information
Locus ID:
gene-QYE76_054960
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc-ribbon
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 241967864 | 241970744 | - | gene-QYE76_054960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 33,065.69 Da | 42.20 | 69.73 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 234 | 290 | 1.1E-17 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 51 | 132 | 5.4E-19 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 186 | 229 | 1.1E-7 | IPR001841 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 48 | 122 | 6.67E-17 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 186 | 234 | 1.47E-9 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 123 | 180 | 3.4E-19 | IPR037275 |
| Gene3D | G3DSA:2.20.28.10 | - | 260 | 292 | 1.3E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 169 | 259 | 1.3E-10 | IPR013083 |
| SMART | SM00184 | ring_2 | 187 | 229 | 1.8E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 187 | 230 | 11.972923 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 44 | 120 | 25.493261 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 122 | 186 | 34.44981 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25560.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_047054979.1 | probable E3 ubiquitin-protein ligase RZFP34 [Lolium rigidum] | 0 |
| Q5JL96 | Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica OX=39947 GN=RZFP34 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6XFH6 | RING finger and CHY zinc finger domain-containing protein 1 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology