Basic Information
Locus ID:
gene-QYE76_054697
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 232340677 | 232341624 | + | gene-QYE76_054697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.37 | 32,954.29 Da | 40.55 | 57.14 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 78 | 308 | 3.60803E-116 | - |
| CDD | cd00035 | ChtBD1 | 22 | 60 | 8.41563E-15 | - |
| Pfam | PF00187 | Chitin recognition protein | 22 | 59 | 1.7E-11 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 77 | 308 | 2.3E-138 | IPR000726 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 74 | 314 | 5.91E-113 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 22 | 69 | 1.7E-11 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 20 | 62 | 4.1E-14 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 82 | 314 | 9.6E-124 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 160 | 217 | 9.6E-124 | - |
| SMART | SM00270 | ChitinBD_3 | 22 | 59 | 1.8E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 315 | 1.4E-128 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 20 | 61 | 10.831136 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 32 | 51 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 221 | 231 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 45 | 52 | 1.2E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 38 | 45 | 1.2E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 30 | 38 | 1.2E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_047055523.1 | chitinase 1-like [Lolium rigidum] | 0 |
| Q42993 | Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1 | 0 | |
| TrEMBL | B8R3R6 | chitinase OS=Festuca arundinacea OX=4606 GN=Chit1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology