Basic Information
Locus ID:
gene-QYE76_054658
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
E3 ubiquitin ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 231030549 | 231042580 | - | gene-QYE76_054658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 136,311.45 Da | 44.59 | 76.82 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 41 | 167 | 3.42665E-32 | - |
| CDD | cd12108 | Hr-like | 277 | 405 | 8.6919E-19 | - |
| CDD | cd12108 | Hr-like | 628 | 785 | 1.80205E-27 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1094 | 1137 | 4.63007E-18 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 276 | 406 | 1.3E-6 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1142 | 1199 | 6.8E-24 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 45 | 169 | 8.1E-14 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 966 | 1041 | 4.2E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 626 | 786 | 3.4E-8 | IPR012312 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 958 | 1022 | 1.1E-16 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1093 | 1140 | 2.69E-7 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1032 | 1087 | 3.14E-15 | IPR037275 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1090 | 1138 | 2.2E-8 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 37 | 187 | 2.9E-34 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 276 | 423 | 2.3E-18 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 623 | 850 | 2.2E-25 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1166 | 1207 | 6.0E-17 | - |
| SMART | SM00184 | ring_2 | 1095 | 1136 | 1.7E-5 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 959 | 1028 | 25.740093 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1031 | 1094 | 29.816021 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1095 | 1136 | 11.235273 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 858 | 880 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_051225497.1 | zinc finger protein BRUTUS [Lolium perenne] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A453FBW8 | CHY-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology