Basic Information
Locus ID:
gene-QYE76_054432
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 224195399 | 224208420 | - | gene-QYE76_054432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 143,698.44 Da | 47.65 | 79.60 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 836 | 1006 | 1.54547E-57 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 875 | 971 | 4.0E-13 | IPR000477 |
| Pfam | PF03732 | Retrotransposon gag protein | 27 | 123 | 5.5E-19 | IPR005162 |
| Pfam | PF03732 | Retrotransposon gag protein | 265 | 355 | 3.4E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 796 | 1032 | 2.89E-69 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 976 | 1012 | 1.6E-8 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 798 | 956 | 1.4E-47 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 896 | 972 | 1.4E-47 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 546 | 663 | 3.0E-5 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1229 | 1244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1225 | 1244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 180 | - | - |
| Coils | Coil | Coil | 1126 | 1146 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_023521407.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A4Y1QSK5 | RNA-directed DNA polymerase OS=Prunus dulcis OX=3755 GN=Prudu_003167 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |