Basic Information
Locus ID:
gene-QYE76_054387
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 222242074 | 222251541 | + | gene-QYE76_054387 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 153,918.09 Da | 46.55 | 87.11 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1025 | 1143 | 8.13685E-56 | - |
| CDD | cd00303 | retropepsin_like | 515 | 612 | 1.00882E-12 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 215 | 305 | 7.1E-9 | IPR005162 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 994 | 1092 | 1.3E-33 | IPR041577 |
| SUPERFAMILY | SSF50630 | Acid proteases | 512 | 620 | 5.29E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 781 | 1126 | 1.11E-96 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 773 | 861 | 1.4E-16 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 496 | 633 | 4.7E-18 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 862 | 930 | 9.7E-14 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 940 | 1032 | 1.1E-27 | IPR043128 |
| Coils | Coil | Coil | 48 | 68 | - | - |
| Coils | Coil | Coil | 1230 | 1250 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021744072.1 | uncharacterized protein LOC110710127 [Chenopodium quinoa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |