halophFGD

Basic Information

Locus ID: gene-QYE76_054335

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	219636199	219640145	-	gene-QYE76_054335

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
11.30	113,499.97 Da	65.48	72.48	-0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00665	Integrase core domain	357	450	1.8E-10	IPR001584
Pfam	PF07727	Reverse transcriptase (RNA-dependent DNA polymerase)	804	876	7.8E-12	IPR013103
Pfam	PF07727	Reverse transcriptase (RNA-dependent DNA polymerase)	881	980	1.1E-16	IPR013103
SUPERFAMILY	SSF53098	Ribonuclease H-like	359	521	1.07E-28	IPR012337
SUPERFAMILY	SSF56672	DNA/RNA polymerases	843	1020	2.89E-10	IPR043502
Gene3D	G3DSA:3.30.420.10	-	347	521	1.1E-29	IPR036397
ProSiteProfiles	PS50994	Integrase catalytic domain profile.	329	513	17.731518	IPR001584
MobiDBLite	mobidb-lite	consensus disorder prediction	563	629	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	121	144	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	160	219	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	15	31	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	297	338	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	37	-	-

Gene Ontology

Biological Process:

GO:0015074 (DNA integration)

Molecular Function:

GO:0003676 (nucleic acid binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23160.2	-
RefSeq	XP_020401379.2	LOW QUALITY PROTEIN: uncharacterized protein LOC103642667 [Zea mays]
Swiss-Prot	Q9ZT94	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1
TrEMBL	Q8S805	Putative copia-type polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0020E23.19 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	11	Sbi_jg22532, Sbi_jg22994, Sbi_jg35991, Sbi_jg47084 ... Sbi_jg5628, Sbi_jg58328, Sbi_jg60530, Sbi_jg61478, Sbi_jg63342, Sbi_jg8665, Sbi_jg9642
Amaranthaceae	Salicornia europaea	3	Seu_jg13583, Seu_jg220, Seu_jg24372
Amaranthaceae	Suaeda glauca	22	Sgl20258, Sgl21425, Sgl22765, Sgl23137, Sgl26539, Sgl26751 ... Sgl28247, Sgl28348, Sgl34681, Sgl35523, Sgl40897, Sgl43954, Sgl43993, Sgl48719, Sgl48762, Sgl51791, Sgl52022, Sgl53267, Sgl54094, Sgl55419, Sgl57325, Sgl58530
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000004351, gene:ENSEOMG00000049261
Anacardiaceae	Pistacia vera	1	pistato.v30096180
Asteraceae	Flaveria trinervia	1	Ftri3G03871
Brassicaceae	Schrenkiella parvula	1	Sp7g03155.v2.2
Brassicaceae	Brassica nigra	13	BniB01g008680.2N, BniB01g011550.2N, BniB01g033040.2N ... BniB02g033300.2N, BniB04g047250.2N, BniB04g052240.2N, BniB05g063000.2N, BniB06g045160.2N, BniB07g001750.2N, BniB07g029480.2N, BniB07g034250.2N, BniB07g043950.2N, BniB08g017720.2N
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno02g08420, gene.Cymno02g12120, gene.Cymno07g04820
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g15590, gene.Thate06g10480
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-7277
Plantaginaceae	Plantago ovata	7	Pov_00001112, Pov_00012497, Pov_00029344, Pov_00029907 ... Pov_00031130, Pov_00035796, Pov_00041323
Plumbaginaceae	Limonium bicolor	2	Lb1G00201, Lb1G06209
Poaceae	Echinochloa crus-galli	3	CH01.4204, CH02.4285, CH02.754
Poaceae	Lolium multiflorum	23	gene-QYE76_000053, gene-QYE76_005675, gene-QYE76_009235 ... gene-QYE76_009560, gene-QYE76_012081, gene-QYE76_012926, gene-QYE76_013696, gene-QYE76_016216, gene-QYE76_022787, gene-QYE76_024878, gene-QYE76_025602, gene-QYE76_025751, gene-QYE76_034510, gene-QYE76_038282, gene-QYE76_053921, gene-QYE76_054335, gene-QYE76_055424, gene-QYE76_057980, gene-QYE76_059298, gene-QYE76_062503, gene-QYE76_064015, gene-QYE76_066038, gene-QYE76_071481
Poaceae	Oryza coarctata	7	Oco02G011690, Oco02G031780, Oco03G007110, Oco03G009910 ... Oco09G006540, Oco16G006370, Oco22G008980
Poaceae	Sporobolus alterniflorus	24	Chr01G024190, Chr01G024200, Chr05G013180, Chr05G013190 ... Chr07G010460, Chr07G013140, Chr08G012100, Chr08G012270, Chr09G005120, Chr12G015710, Chr13G016330, Chr15G017680, Chr16G013230, Chr17G009520, Chr17G009530, Chr18G003390, Chr21G013910, Chr24G013840, Chr25G010030, Chr25G010040, Chr25G014830, Chr25G014840, Chr29G009710, Chr30G014440
Poaceae	Zoysia japonica	7	nbis-gene-15370, nbis-gene-31910, nbis-gene-43348 ... nbis-gene-5120, nbis-gene-56072, nbis-gene-58384, nbis-gene-58844
Posidoniaceae	Posidonia oceanica	1	gene.Posoc01g29300
Solanaceae	Solanum pennellii	1	gene-LOC114075978
Tamaricaceae	Reaumuria soongarica	3	MSTRG.20127_chr11_-, STRG.30077_chr10_+, gene_8045