Basic Information
Locus ID:
gene-QYE76_053655
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 195702460 | 195703167 | - | gene-QYE76_053655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 25,271.12 Da | 55.20 | 76.21 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 161 | 223 | 5.75202E-20 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 80 | 139 | 2.1E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 160 | 222 | 1.8E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 62 | 223 | 1.1E-39 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 67 | 149 | 2.2E-16 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 154 | 230 | 7.5E-24 | - |
| SMART | SM00054 | efh_1 | 118 | 146 | 0.21 | IPR002048 |
| SMART | SM00054 | efh_1 | 161 | 189 | 6.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 197 | 225 | 1.5E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 81 | 109 | 0.076 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 193 | 228 | 13.648647 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 157 | 192 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 77 | 112 | 12.923368 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 114 | 149 | 10.747526 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 170 | 182 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 127 | 139 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 90 | 102 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 206 | 218 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_047053260.1 | probable calcium-binding protein CML12 [Lolium rigidum] | 0 |
| Q5ZD81 | Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 GN=CML12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A077S1F2 | Calcium-binding protein CML16 OS=Triticum aestivum OX=4565 GN=TRAES_3BF271400010CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology