Basic Information
Locus ID:
gene-QYE76_053533
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 191925492 | 191934139 | - | gene-QYE76_053533 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 72,850.02 Da | 43.19 | 83.07 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01655 | Ribosomal protein L32 | 80 | 138 | 1.9E-5 | IPR001515 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 248 | 347 | 5.6E-16 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 210 | 370 | 7.85E-34 | IPR038765 |
| SUPERFAMILY | SSF52042 | Ribosomal protein L32e | 71 | 143 | 5.89E-12 | IPR036351 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 202 | 350 | 2.1E-25 | - |
| SMART | SM01393 | Ribosomal_L32e_2 | 79 | 154 | 2.2E-4 | IPR001515 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 47 | 350 | 14.882848 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 282 | 299 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 404 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.3 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_038987973.1 | ubiquitin carboxyl-terminal hydrolase 12-like isoform X8 [Phoenix dactylifera] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D6IUI7 | Ubiquitin carboxyl-terminal hydrolase 13 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d023640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-QYE76_053533.