Basic Information
Locus ID:
gene-QYE76_053431
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 188655607 | 188657415 | + | gene-QYE76_053431 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 36,864.98 Da | 48.11 | 65.96 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 166 | 283 | 6.1E-6 | IPR003441 |
| Pfam | PF01466 | Skp1 family, dimerisation domain | 299 | 322 | 5.2E-7 | IPR016072 |
| SUPERFAMILY | SSF101941 | NAC domain | 5 | 53 | 4.32E-5 | IPR036093 |
| SUPERFAMILY | SSF101941 | NAC domain | 166 | 289 | 6.41E-7 | IPR036093 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 259 | 324 | 7.2E-6 | IPR011333 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 1 | 53 | 11.944502 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75950.1 | S phase kinase-associated protein 1. SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. | 0 |
| RefSeq | XP_047059194.1 | uncharacterized protein LOC124665878 [Lolium rigidum] | 0 |
| TrEMBL | F2DDB2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_022773, gene-QYE76_053431, gene-QYE76_068327 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-18588 |