Basic Information
Locus ID:
gene-QYE76_053410
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 187629859 | 187637073 | + | gene-QYE76_053410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 94,976.99 Da | 51.27 | 87.27 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 86 | 176 | 1.3E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 617 | 679 | 5.34E-12 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 367 | 483 | 2.9E-5 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 608 | 734 | 2.1E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 814 | 841 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021750881.1 | uncharacterized protein LOC110716562 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A2Z6PWT2 | Retrotrans_gag domain-containing protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_418330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |