Basic Information
Locus ID:
gene-QYE76_052876
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
JAB/MPN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 163597198 | 163603313 | + | gene-QYE76_052876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 38,965.68 Da | 55.49 | 79.43 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 175 | 349 | 1.51049E-103 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 172 | 278 | 1.1E-16 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 175 | 304 | 1.44E-19 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 162 | 351 | 8.6E-72 | - |
| SMART | SM00232 | pad1_6 | 174 | 302 | 2.9E-12 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 174 | 305 | 25.328644 | IPR037518 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48790.1 | associated molecule with the SH3 domain of STAM 1. | 0 |
| RefSeq | XP_051209868.1 | AMSH-like ubiquitin thioesterase 3 isoform X4 [Lolium perenne] | 0 |
| Q5PNU3 | AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2 | 0 | |
| TrEMBL | I1HF61 | MPN domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100827373 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology