Basic Information
Locus ID:
gene-QYE76_052552
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
cysteine-rich RLK (RECEPTOR-like protein kinase) 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 151815847 | 151835321 | - | gene-QYE76_052552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 165,193.64 Da | 47.57 | 85.67 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 985 | 1082 | 1.24923E-12 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 479 | 660 | 2.2E-54 | IPR013103 |
| Pfam | PF13976 | GAG-pre-integrase domain | 342 | 410 | 8.0E-8 | IPR025724 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 660 | 775 | 2.45E-35 | IPR043502 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 478 | 652 | 5.56E-14 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 966 | 1107 | 2.4E-17 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 643 | 722 | 1.3E-19 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 1244 | 1307 | 3.2E-6 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 725 | 792 | 3.9E-16 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1440 | 1467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1450 | 1467 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051225350.1 | uncharacterized protein LOC127343270 [Lolium perenne] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | M8C6Q8 | UDP-glucose:glycoprotein glucosyltransferase 1 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |