Basic Information
Locus ID:
gene-QYE76_051404
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Glycosyl hydrolase family 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 107580386 | 107581640 | + | gene-QYE76_051404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 40,340.22 Da | 44.49 | 55.41 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 81 | 154 | 5.9E-6 | IPR005162 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 309 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051197464.1 | uncharacterized protein LOC127310874 [Lolium perenne] | 0 |
| TrEMBL | A0A2Z6PWQ2 | Retrotrans_gag domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_417430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 82 | gene-QYE76_000928, gene-QYE76_001711, gene-QYE76_003439 ... |