halophFGD

Basic Information

Locus ID: gene-QYE76_051136

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: transposition, RNA-mediated

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	96384212	96391573	-	gene-QYE76_051136

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.41	120,776.10 Da	46.97	71.76	-0.63

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd09279	RNase_HI_like	139	264	2.54287E-43	-
Pfam	PF17917	RNase H-like domain found in reverse transcriptase	3	102	1.2E-13	IPR041373
Pfam	PF13456	Reverse transcriptase-like	143	261	3.8E-20	IPR002156
SUPERFAMILY	SSF56672	DNA/RNA polymerases	2	102	3.26E-7	IPR043502
SUPERFAMILY	SSF53098	Ribonuclease H-like	138	266	7.08E-21	IPR012337
Gene3D	G3DSA:1.10.340.70	-	368	453	3.6E-7	-
Gene3D	G3DSA:3.30.420.10	-	140	270	4.3E-29	IPR036397
ProSiteProfiles	PS50879	RNase H domain profile.	135	264	12.043768	IPR002156
MobiDBLite	mobidb-lite	consensus disorder prediction	1013	1031	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	795	877	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	752	773	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1013	1053	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	825	840	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	752	771	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	846	877	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	574	597	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	574	596	-	-
Coils	Coil	Coil	1008	1028	-	-

Gene Ontology

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0004523 (RNA-DNA hybrid ribonuclease activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G01410.1	Polynucleotidyl transferase, ribonuclease H-like superfamily protein.
RefSeq	XP_051211216.1	uncharacterized protein LOC127328675 [Lolium perenne]
Swiss-Prot	Q9HSF6	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1
TrEMBL	A0A7H4LIJ2	Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS3042 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	77	gene-QYE76_000700, gene-QYE76_000963, gene-QYE76_001054 ... gene-QYE76_002156, gene-QYE76_002421, gene-QYE76_002536, gene-QYE76_002674, gene-QYE76_002898, gene-QYE76_003810, gene-QYE76_009902, gene-QYE76_009972, gene-QYE76_010249, gene-QYE76_011923, gene-QYE76_012527, gene-QYE76_012573, gene-QYE76_012827, gene-QYE76_013933, gene-QYE76_015865, gene-QYE76_019560, gene-QYE76_021137, gene-QYE76_022857, gene-QYE76_024219, gene-QYE76_024421, gene-QYE76_024666, gene-QYE76_026189, gene-QYE76_026948, gene-QYE76_029594, gene-QYE76_029599, gene-QYE76_029788, gene-QYE76_029996, gene-QYE76_030140, gene-QYE76_031218, gene-QYE76_031311, gene-QYE76_032317, gene-QYE76_032628, gene-QYE76_032726, gene-QYE76_033624, gene-QYE76_035689, gene-QYE76_035710, gene-QYE76_037188, gene-QYE76_038975, gene-QYE76_039501, gene-QYE76_040156, gene-QYE76_040867, gene-QYE76_041475, gene-QYE76_041643, gene-QYE76_041929, gene-QYE76_042380, gene-QYE76_042624, gene-QYE76_042875, gene-QYE76_049733, gene-QYE76_050326, gene-QYE76_050427, gene-QYE76_050768, gene-QYE76_051136, gene-QYE76_051594, gene-QYE76_052903, gene-QYE76_053291, gene-QYE76_053376, gene-QYE76_054128, gene-QYE76_054129, gene-QYE76_054913, gene-QYE76_054957, gene-QYE76_054971, gene-QYE76_056154, gene-QYE76_056909, gene-QYE76_059498, gene-QYE76_060289, gene-QYE76_062070, gene-QYE76_062973, gene-QYE76_063559, gene-QYE76_064167, gene-QYE76_065044, gene-QYE76_066571, gene-QYE76_067098, gene-QYE76_068891, gene-QYE76_069645