Basic Information
Locus ID:
gene-QYE76_051112
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
LOB domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 95610292 | 95616113 | + | gene-QYE76_051112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 42,534.53 Da | 45.55 | 72.20 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03195 | Lateral organ boundaries (LOB) domain | 254 | 351 | 1.1E-24 | IPR004883 |
| Gene3D | G3DSA:1.10.8.10 | - | 37 | 81 | 2.8E-5 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 118 | 161 | 9.727533 | IPR015940 |
| ProSiteProfiles | PS50891 | LOB domain profile. | 253 | 354 | 20.052284 | IPR004883 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 40 | 83 | 9.197397 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 250 | - | - |
| Coils | Coil | Coil | 333 | 360 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042500129.1 | LOB domain-containing protein 22-like [Macadamia integrifolia] | 0 |
| TrEMBL | A0A5C7GSE3 | AP2/ERF domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026799 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_051112, gene-QYE76_051119 |