Basic Information
Locus ID:
gene-QYE76_050875
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 86711323 | 86718632 | + | gene-QYE76_050875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 126,800.21 Da | 50.44 | 85.23 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 561 | 700 | 6.12292E-35 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 793 | 911 | 6.69006E-57 | - |
| CDD | cd00303 | retropepsin_like | 334 | 411 | 1.34677E-6 | - |
| Pfam | PF17917 | RNase H-like domain found in reverse transcriptase | 787 | 890 | 7.4E-34 | IPR041373 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 520 | 894 | 5.11E-105 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 523 | 620 | 4.3E-20 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 635 | 706 | 8.0E-23 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 621 | 634 | 4.3E-20 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 709 | 802 | 5.2E-25 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 315 | 417 | 1.8E-7 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| Coils | Coil | Coil | 998 | 1018 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048538050.1 | uncharacterized protein LOC125516778, partial [Triticum urartu] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2N9F815 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10796 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |