Basic Information
Locus ID:
gene-QYE76_050661
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 78955433 | 78962248 | - | gene-QYE76_050661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 106,733.49 Da | 45.27 | 81.62 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17921 | Integrase zinc binding domain | 516 | 566 | 3.8E-10 | IPR041588 |
| Pfam | PF00665 | Integrase core domain | 584 | 680 | 4.3E-11 | IPR001584 |
| Pfam | PF03732 | Retrotransposon gag protein | 57 | 135 | 2.9E-8 | IPR005162 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 583 | 733 | 4.81E-40 | IPR012337 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 359 | 479 | 4.34E-21 | IPR043502 |
| Gene3D | G3DSA:3.30.420.10 | - | 582 | 751 | 3.1E-50 | IPR036397 |
| Gene3D | G3DSA:1.10.340.70 | - | 504 | 566 | 5.2E-11 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 312 | 458 | 8.5E-19 | IPR043128 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 581 | 739 | 23.620695 | IPR001584 |
| Coils | Coil | Coil | 810 | 830 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045797767.1 | uncharacterized protein LOC123891949 [Trifolium pratense] | 0 |
| TrEMBL | A5AHB6 | Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_032375 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |