halophFGD

Basic Information

Locus ID: gene-QYE76_050653

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Uncharacterized protein K02A2.6-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	78721918	78728294	-	gene-QYE76_050653

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.13	198,602.64 Da	50.00	73.64	-0.57

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd09279	RNase_HI_like	1312	1438	1.7618E-36	-
CDD	cd00303	retropepsin_like	832	916	8.59573E-10	-
Pfam	PF17919	RNase H-like domain found in reverse transcriptase	1142	1246	1.7E-16	IPR041577
Pfam	PF03732	Retrotransposon gag protein	492	572	3.3E-8	IPR005162
Pfam	PF13456	Reverse transcriptase-like	1316	1434	1.6E-13	IPR002156
SUPERFAMILY	SSF56672	DNA/RNA polymerases	1020	1272	3.11E-51	IPR043502
SUPERFAMILY	SSF53098	Ribonuclease H-like	1310	1434	7.08E-18	IPR012337
SUPERFAMILY	SSF53098	Ribonuclease H-like	1570	1633	1.8E-10	IPR012337
Gene3D	G3DSA:3.30.420.10	-	1566	1629	2.6E-10	IPR036397
Gene3D	G3DSA:2.40.70.10	Acid Proteases	818	938	4.2E-8	IPR021109
Gene3D	G3DSA:3.30.70.270	-	1089	1172	1.2E-15	IPR043128
Gene3D	G3DSA:3.30.70.270	-	1019	1079	1.9E-10	IPR043128
Gene3D	G3DSA:3.30.420.10	-	1313	1442	4.5E-24	IPR036397
ProSiteProfiles	PS50879	RNase H domain profile.	1308	1438	10.914341	IPR002156
ProSiteProfiles	PS50994	Integrase catalytic domain profile.	1565	1649	8.809498	IPR001584
MobiDBLite	mobidb-lite	consensus disorder prediction	613	695	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	18	54	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	309	351	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	727	751	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	240	354	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	613	691	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	727	758	-	-
Coils	Coil	Coil	201	230	-	-

Gene Ontology

Biological Process:

GO:0015074 (DNA integration)

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0004523 (RNA-DNA hybrid ribonuclease activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G01410.1	Polynucleotidyl transferase, ribonuclease H-like superfamily protein.
RefSeq	XP_051215001.1	uncharacterized protein LOC127332710 [Lolium perenne]
TrEMBL	Q2QU23	Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g17740 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	82	gene-QYE76_000928, gene-QYE76_001711, gene-QYE76_003439 ... gene-QYE76_003570, gene-QYE76_006057, gene-QYE76_007340, gene-QYE76_008138, gene-QYE76_008140, gene-QYE76_008324, gene-QYE76_008826, gene-QYE76_009632, gene-QYE76_009946, gene-QYE76_010020, gene-QYE76_010660, gene-QYE76_011332, gene-QYE76_013429, gene-QYE76_013760, gene-QYE76_013994, gene-QYE76_015018, gene-QYE76_015330, gene-QYE76_015596, gene-QYE76_015834, gene-QYE76_019881, gene-QYE76_022649, gene-QYE76_023319, gene-QYE76_023589, gene-QYE76_023617, gene-QYE76_026130, gene-QYE76_029103, gene-QYE76_029619, gene-QYE76_029826, gene-QYE76_030276, gene-QYE76_030377, gene-QYE76_031129, gene-QYE76_031881, gene-QYE76_032116, gene-QYE76_032279, gene-QYE76_032397, gene-QYE76_034124, gene-QYE76_035420, gene-QYE76_035674, gene-QYE76_039214, gene-QYE76_040595, gene-QYE76_041606, gene-QYE76_042171, gene-QYE76_042411, gene-QYE76_042631, gene-QYE76_044141, gene-QYE76_044684, gene-QYE76_044800, gene-QYE76_045754, gene-QYE76_046617, gene-QYE76_046727, gene-QYE76_046776, gene-QYE76_046784, gene-QYE76_050595, gene-QYE76_050653, gene-QYE76_051404, gene-QYE76_051447, gene-QYE76_052811, gene-QYE76_052862, gene-QYE76_054113, gene-QYE76_054126, gene-QYE76_055254, gene-QYE76_056358, gene-QYE76_056631, gene-QYE76_059606, gene-QYE76_060562, gene-QYE76_060860, gene-QYE76_061592, gene-QYE76_062038, gene-QYE76_062198, gene-QYE76_063908, gene-QYE76_066708, gene-QYE76_066791, gene-QYE76_066914, gene-QYE76_067235, gene-QYE76_067303, gene-QYE76_067573, gene-QYE76_069896, gene-QYE76_070728, gene-QYE76_071938