Basic Information
Locus ID:
gene-QYE76_050641
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 78456334 | 78460832 | - | gene-QYE76_050641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 69,871.55 Da | 51.06 | 66.33 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 372 | 501 | 7.18825E-64 | - |
| CDD | cd00201 | WW | 16 | 45 | 1.55617E-4 | IPR001202 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 384 | 492 | 8.5E-33 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 178 | 346 | 1.9E-48 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 224 | 508 | 3.8E-76 | IPR027417 |
| SUPERFAMILY | SSF51045 | WW domain | 10 | 48 | 1.14E-7 | IPR036020 |
| Gene3D | G3DSA:3.40.50.300 | - | 363 | 533 | 3.2E-59 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 127 | 362 | 1.9E-87 | IPR027417 |
| SMART | SM00487 | ultradead3 | 172 | 375 | 1.1E-63 | IPR014001 |
| SMART | SM00490 | helicmild6 | 408 | 492 | 2.4E-33 | IPR001650 |
| SMART | SM00456 | ww_5 | 14 | 47 | 1.3E-5 | IPR001202 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 153 | 181 | 10.728894 | IPR014014 |
| ProSiteProfiles | PS50020 | WW/rsp5/WWP domain profile. | 13 | 47 | 11.230801 | IPR001202 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 387 | 531 | 26.18906 | IPR001650 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 184 | 358 | 31.420975 | IPR014001 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 304 | 312 | - | IPR000629 |
| ProSitePatterns | PS01159 | WW/rsp5/WWP domain signature. | 19 | 45 | - | IPR001202 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_051222937.1 | DEAD-box ATP-dependent RNA helicase 14-like isoform X2 [Lolium perenne] | 0 |
| Q5VQL1 | DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6GN66 | DEAD-box ATP-dependent RNA helicase 14 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology