Basic Information
Locus ID:
gene-QYE76_050624
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77899416 | 77904941 | + | gene-QYE76_050624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 163,582.88 Da | 38.32 | 106.11 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 307 | 594 | 1.7736E-98 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 928 | 1222 | 5.72567E-88 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1245 | 1465 | 5.75956E-122 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 620 | 820 | 1.75902E-110 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 931 | 1174 | 7.4E-31 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 312 | 572 | 7.0E-21 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1264 | 1412 | 2.6E-28 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 638 | 772 | 8.2E-20 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1236 | 1477 | 2.86E-65 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 616 | 841 | 1.33E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 927 | 1229 | 6.67E-54 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 296 | 602 | 3.4E-31 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 890 | 1228 | 4.8E-64 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 604 | 851 | 5.2E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 285 | 602 | 1.0E-46 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1231 | 1483 | 1.3E-77 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1273 | 1464 | 1.0E-10 | IPR003593 |
| SMART | SM00382 | AAA_5 | 647 | 820 | 9.8E-12 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 620 | 843 | 22.829239 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 306 | 586 | 28.766281 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 930 | 1210 | 37.590679 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1247 | 1481 | 16.673473 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 745 | 759 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_051222906.1 | ABC transporter C family member 3-like [Lolium perenne] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3MEV5 | ABC transporter C family member 3 OS=Brachypodium distachyon OX=15368 GN=100842637 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology