Basic Information
Locus ID:
gene-QYE76_050621
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77829805 | 77835280 | - | gene-QYE76_050621 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 162,811.72 Da | 35.64 | 105.21 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03250 | ABCC_MRP_domain1 | 619 | 819 | 1.83037E-93 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 927 | 1221 | 2.26765E-90 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1244 | 1464 | 2.84041E-119 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 306 | 593 | 4.42066E-88 | IPR044746 |
| Pfam | PF00005 | ABC transporter | 637 | 771 | 2.5E-18 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 929 | 1172 | 3.6E-28 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 313 | 572 | 8.0E-21 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1263 | 1411 | 1.7E-27 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 615 | 840 | 1.25E-55 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1236 | 1476 | 7.01E-64 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 296 | 601 | 2.09E-31 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 926 | 1228 | 5.62E-49 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1231 | 1482 | 1.0E-76 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 604 | 851 | 2.1E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 889 | 1227 | 4.7E-59 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 284 | 601 | 9.3E-46 | IPR036640 |
| SMART | SM00382 | AAA_5 | 646 | 819 | 6.2E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1272 | 1457 | 7.7E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1246 | 1480 | 16.106583 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 305 | 585 | 29.766418 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 619 | 842 | 22.675844 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 929 | 1209 | 34.400131 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 744 | 758 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 899 | - | - |
| Coils | Coil | Coil | 1479 | 1487 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_047061266.1 | ABC transporter C family member 3-like [Lolium rigidum] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I7B4Z8 | ABC transporter C family member 3 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology