Basic Information
Locus ID:
gene-QYE76_050618
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77806802 | 77810265 | - | gene-QYE76_050618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 86,318.46 Da | 36.50 | 103.11 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 220 | 514 | 8.20071E-91 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 537 | 757 | 1.9007E-123 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 223 | 466 | 6.8E-30 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 17 | 64 | 3.2E-8 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 556 | 704 | 1.9E-28 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 2 | 133 | 9.01E-33 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 219 | 521 | 3.27E-52 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 528 | 771 | 1.68E-65 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 142 | 5.8E-42 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 524 | 775 | 2.3E-76 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 181 | 520 | 7.0E-65 | IPR036640 |
| SMART | SM00382 | AAA_5 | 565 | 750 | 3.0E-10 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 222 | 502 | 35.940266 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 539 | 773 | 16.213291 | IPR003439 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_047061267.1 | ABC transporter C family member 3-like [Lolium rigidum] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3MEV5 | ABC transporter C family member 3 OS=Brachypodium distachyon OX=15368 GN=100842637 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology