Basic Information
Locus ID:
gene-QYE76_050615
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77705274 | 77710782 | - | gene-QYE76_050615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 164,329.39 Da | 37.40 | 103.61 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03250 | ABCC_MRP_domain1 | 630 | 830 | 8.00399E-94 | - |
| CDD | cd03244 | ABCC_MRP_domain2 | 1255 | 1475 | 1.02246E-119 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 317 | 604 | 8.50466E-90 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 938 | 1232 | 1.0512E-89 | IPR044726 |
| Pfam | PF00005 | ABC transporter | 1274 | 1422 | 1.7E-27 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 648 | 782 | 2.5E-18 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 940 | 1183 | 3.6E-28 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 330 | 583 | 2.3E-22 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 937 | 1239 | 5.62E-49 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1247 | 1487 | 7.1E-64 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 306 | 612 | 3.79E-33 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 626 | 851 | 1.25E-55 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 900 | 1238 | 4.8E-59 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 615 | 862 | 2.2E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 295 | 612 | 8.6E-48 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1242 | 1493 | 1.1E-76 | IPR027417 |
| SMART | SM00382 | AAA_5 | 657 | 830 | 6.2E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1283 | 1468 | 7.7E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 630 | 853 | 22.675844 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 940 | 1220 | 34.400131 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1257 | 1491 | 16.106583 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 316 | 596 | 30.54409 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 755 | 769 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 885 | 910 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_051222898.1 | ABC transporter C family member 3-like isoform X4 [Lolium perenne] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3MEV5 | ABC transporter C family member 3 OS=Brachypodium distachyon OX=15368 GN=100842637 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology