Basic Information
Locus ID:
gene-QYE76_050614
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77686093 | 77690969 | - | gene-QYE76_050614 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 138,204.86 Da | 37.26 | 104.49 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 691 | 985 | 7.47932E-85 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1008 | 1228 | 8.1409E-119 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 383 | 583 | 8.92755E-110 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 70 | 357 | 1.89912E-92 | IPR044746 |
| Pfam | PF00664 | ABC transporter transmembrane region | 73 | 335 | 4.8E-19 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1027 | 1175 | 7.0E-28 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 694 | 937 | 1.6E-28 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 401 | 535 | 2.7E-20 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 999 | 1242 | 3.55E-64 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 380 | 604 | 7.66E-56 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 691 | 992 | 2.09E-50 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 59 | 365 | 2.35E-29 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 48 | 365 | 1.4E-46 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 652 | 991 | 6.7E-63 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 372 | 613 | 6.8E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 995 | 1246 | 2.2E-75 | IPR027417 |
| SMART | SM00382 | AAA_5 | 410 | 583 | 1.9E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1036 | 1221 | 6.9E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1010 | 1244 | 16.226631 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 69 | 349 | 26.971359 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 383 | 606 | 23.109348 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 693 | 973 | 35.158787 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 508 | 522 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_047061267.1 | ABC transporter C family member 3-like [Lolium rigidum] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3MEV5 | ABC transporter C family member 3 OS=Brachypodium distachyon OX=15368 GN=100842637 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology