Basic Information
Locus ID:
gene-QYE76_050612
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77642991 | 77648522 | - | gene-QYE76_050612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 164,745.83 Da | 35.91 | 104.17 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 938 | 1232 | 5.8056E-92 | IPR044726 |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 318 | 605 | 1.49474E-89 | IPR044746 |
| CDD | cd03250 | ABCC_MRP_domain1 | 631 | 831 | 2.03157E-111 | - |
| CDD | cd03244 | ABCC_MRP_domain2 | 1255 | 1475 | 1.52128E-117 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 942 | 1183 | 2.7E-29 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 331 | 584 | 2.9E-22 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 649 | 783 | 3.3E-19 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1274 | 1422 | 3.1E-27 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1247 | 1487 | 2.01E-63 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 925 | 1239 | 1.12E-50 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 627 | 852 | 3.8E-56 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 306 | 605 | 4.58E-32 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 614 | 863 | 4.0E-76 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1242 | 1493 | 3.4E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 899 | 1238 | 1.3E-60 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 296 | 613 | 3.4E-47 | IPR036640 |
| SMART | SM00382 | AAA_5 | 658 | 831 | 8.1E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1283 | 1474 | 5.1E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1257 | 1491 | 16.186615 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 940 | 1220 | 35.25766 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 317 | 597 | 30.005995 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 631 | 854 | 22.989302 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 756 | 770 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 887 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 910 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 910 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_051222898.1 | ABC transporter C family member 3-like isoform X4 [Lolium perenne] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I7B4Z8 | ABC transporter C family member 3 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology