Basic Information
Locus ID:
gene-QYE76_050606
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 77526957 | 77532470 | - | gene-QYE76_050606 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 163,401.95 Da | 35.84 | 107.36 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 309 | 596 | 3.44448E-89 | IPR044746 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1246 | 1466 | 2.30221E-117 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 929 | 1223 | 4.87799E-91 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 622 | 822 | 1.54957E-94 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 931 | 1175 | 1.1E-31 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 640 | 774 | 7.8E-19 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1265 | 1413 | 1.2E-26 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 312 | 574 | 4.3E-20 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 298 | 604 | 2.62E-30 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1237 | 1478 | 1.28E-63 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 926 | 1230 | 6.8E-51 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 618 | 843 | 2.66E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 607 | 854 | 3.4E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 891 | 1229 | 4.5E-61 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1233 | 1484 | 3.4E-75 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 287 | 604 | 3.6E-44 | IPR036640 |
| SMART | SM00382 | AAA_5 | 649 | 822 | 1.9E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1274 | 1465 | 1.5E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1248 | 1482 | 16.153269 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 931 | 1211 | 35.63414 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 308 | 588 | 29.173182 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 622 | 845 | 22.982632 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 747 | 761 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 877 | 901 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_047061268.1 | ABC transporter C family member 3-like [Lolium rigidum] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EEK4 | ABC transporter C family member 3 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology