Basic Information
Locus ID:
gene-QYE76_050585
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 76843651 | 76849214 | + | gene-QYE76_050585 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 164,799.16 Da | 38.05 | 105.78 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 941 | 1235 | 9.1114E-88 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 633 | 833 | 7.06023E-109 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 320 | 607 | 1.67952E-93 | IPR044746 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1258 | 1478 | 1.13884E-121 | - |
| Pfam | PF00664 | ABC transporter transmembrane region | 325 | 585 | 2.7E-20 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1277 | 1425 | 2.7E-28 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 651 | 785 | 2.2E-19 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 944 | 1187 | 7.5E-31 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 940 | 1242 | 6.8E-54 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 309 | 615 | 4.32E-31 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 629 | 854 | 1.66E-55 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1249 | 1490 | 2.96E-65 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 617 | 864 | 1.2E-74 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 903 | 1241 | 4.9E-64 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1244 | 1496 | 1.4E-77 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 298 | 615 | 1.3E-46 | IPR036640 |
| SMART | SM00382 | AAA_5 | 1286 | 1477 | 1.0E-10 | IPR003593 |
| SMART | SM00382 | AAA_5 | 660 | 833 | 8.2E-12 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 943 | 1223 | 37.590679 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 633 | 856 | 22.70919 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1260 | 1494 | 16.673473 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 319 | 599 | 28.771986 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 758 | 772 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_051222906.1 | ABC transporter C family member 3-like [Lolium perenne] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I7B4Z8 | ABC transporter C family member 3 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology