Basic Information
Locus ID:
gene-QYE76_050047
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Type III restriction enzyme, res subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 58118663 | 58125099 | - | gene-QYE76_050047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 144,144.02 Da | 68.73 | 51.74 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 772 | 901 | 8.03953E-62 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 577 | 747 | 1.1E-47 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 784 | 892 | 1.2E-32 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 625 | 908 | 4.46E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 527 | 763 | 3.6E-86 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 764 | 934 | 1.8E-58 | IPR027417 |
| SMART | SM00487 | ultradead3 | 572 | 775 | 4.2E-63 | IPR014001 |
| SMART | SM00490 | helicmild6 | 812 | 892 | 6.4E-33 | IPR001650 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 584 | 758 | 30.364693 | IPR014001 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 553 | 581 | 10.840833 | IPR014014 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 787 | 931 | 25.472027 | IPR001650 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 704 | 712 | - | IPR000629 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1200 | 1222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1084 | 1257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1134 | 1195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1301 | 1345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1223 | 1241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 315 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_047056864.1 | DEAD-box ATP-dependent RNA helicase 40-like [Lolium rigidum] | 0 |
| Q8H136 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0Q3FTV5 | DEAD-box ATP-dependent RNA helicase 40 OS=Brachypodium distachyon OX=15368 GN=100835845 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology