Basic Information
Locus ID:
gene-QYE76_049926
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 53649306 | 53649824 | - | gene-QYE76_049926 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 17,367.15 Da | 30.92 | 66.45 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 24 | 172 | 1.60778E-76 | - |
| Pfam | PF00314 | Thaumatin family | 28 | 132 | 1.0E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 21 | 172 | 7.19E-56 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 22 | 172 | 4.3E-51 | IPR037176 |
| SMART | SM00205 | tha2 | 24 | 172 | 5.2E-47 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 139 | 172 | 0.0051 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 145 | 2.9E-46 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 21 | 172 | 37.145409 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 77 | 92 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 43 | 52 | 4.0E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 162 | 171 | 4.0E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 114 | 130 | 4.0E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 65 | 76 | 4.0E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 23 | 35 | 4.0E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 77 | 106 | 4.0E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_047055594.1 | thaumatin-like pathogenesis-related protein 3 [Lolium rigidum] | 0 |
| P50696 | Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa OX=4498 GN=RASTL-2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WLP6 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00167 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology