Basic Information
Locus ID:
gene-QYE76_049726
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 47856798 | 47870662 | + | gene-QYE76_049726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 226,654.09 Da | 48.58 | 83.22 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 1115 | 1212 | 2.90864E-12 | - |
| CDD | cd01647 | RT_LTR | 1422 | 1561 | 2.02428E-35 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1655 | 1773 | 1.57045E-56 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 815 | 905 | 6.0E-9 | IPR005162 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 390 | 501 | 6.4E-36 | IPR025452 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1625 | 1722 | 5.6E-34 | IPR041577 |
| SUPERFAMILY | SSF50630 | Acid proteases | 1112 | 1220 | 8.75E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1381 | 1756 | 1.56E-109 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1096 | 1234 | 6.9E-18 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 1482 | 1495 | 2.0E-20 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1570 | 1663 | 1.7E-27 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 1384 | 1481 | 2.0E-20 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 1496 | 1567 | 1.6E-22 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1800 | 1847 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 711 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1811 | 1830 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 702 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1917 | 1938 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 723 | 742 | - | - |
| Coils | Coil | Coil | 1955 | 1975 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051185024.1 | uncharacterized protein LOC127299149 [Lolium perenne] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A8R7V235 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |