Basic Information
Locus ID:
gene-QYE76_049700
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
strictosidine synthase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 46666447 | 46683856 | - | gene-QYE76_049700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 130,613.32 Da | 51.81 | 86.53 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 129 | 219 | 9.8E-8 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 619 | 794 | 7.12E-35 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 610 | 697 | 7.2E-16 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 370 | 488 | 1.6E-5 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 698 | 773 | 9.2E-17 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 923 | 965 | - | - |
| Coils | Coil | Coil | 928 | 962 | - | - |
| Coils | Coil | Coil | 850 | 870 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021751355.1 | uncharacterized protein LOC110717023 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A2G9HSD1 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06869 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |