Basic Information
Locus ID:
gene-QYE76_049662
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 45623662 | 45624861 | - | gene-QYE76_049662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 44,235.56 Da | 40.38 | 84.11 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 56 | 4.0E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 76 | 5.63E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 67 | 6.0E-9 | - |
| SMART | SM00256 | fbox_2 | 16 | 56 | 1.2E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 133 | 312 | 1.4E-12 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 10 | 56 | 9.497469 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23880.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051221144.1 | uncharacterized protein LOC127339317 [Lolium perenne] | 0 |
| Q9LIR8 | F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9VSB8 | F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_035428, gene-QYE76_035432, gene-QYE76_049662 |
| Poaceae | Oryza coarctata | 1 | Oco06G012710 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g23040.1, LOC_Os05g14290.1 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0204291, Pt_Chr0204295, Pt_Chr0401115 |