Basic Information
Locus ID:
gene-QYE76_049610
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 44081799 | 44083256 | - | gene-QYE76_049610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 55,104.19 Da | 59.90 | 67.44 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16623 | RING-HC_RBR_TRIAD1_like | 119 | 169 | 8.07286E-13 | - |
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 188 | 253 | 2.4E-12 | IPR002867 |
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 274 | 318 | 4.5E-10 | IPR002867 |
| SUPERFAMILY | SSF57850 | RING/U-box | 272 | 328 | 9.53E-18 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 117 | 199 | 8.67E-15 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 188 | 260 | 6.86E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 116 | 200 | 1.3E-15 | IPR013083 |
| Gene3D | G3DSA:1.20.120.1750 | - | 249 | 484 | 9.5E-68 | - |
| SMART | SM00184 | ring_2 | 213 | 283 | 0.29 | IPR001841 |
| SMART | SM00184 | ring_2 | 119 | 167 | 1.4 | IPR001841 |
| SMART | SM00184 | ring_2 | 290 | 324 | 6.3 | IPR001841 |
| SMART | SM00647 | ibrneu5 | 261 | 324 | 0.018 | IPR002867 |
| SMART | SM00647 | ibrneu5 | 187 | 253 | 6.0E-16 | IPR002867 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 115 | 328 | 42.709579 | IPR044066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 119 | 165 | 9.125594 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 302 | 311 | - | IPR017907 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 235 | 244 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31510.1 | IBR domain-containing protein. | 0 |
| RefSeq | XP_047057687.1 | probable E3 ubiquitin-protein ligase ARI7 [Lolium rigidum] | 0 |
| Q84RR0 | Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana OX=3702 GN=ARI7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I3G8 | RBR-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology