Basic Information
Locus ID:
gene-QYE76_049548
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Protein of unknown function (DUF1668)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 41272999 | 41278582 | - | gene-QYE76_049548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 140,667.38 Da | 53.52 | 78.89 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1003 | 1244 | 3.8E-62 | IPR013103 |
| Pfam | PF07893 | Protein of unknown function (DUF1668) | 45 | 173 | 3.4E-10 | IPR012871 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 466 | 599 | 1.1E-17 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1003 | 1311 | 1.16E-27 | IPR043502 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 898 | 924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 950 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051211614.1 | uncharacterized protein LOC127329110 [Lolium perenne] | 0 |
| Q9ZT94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 | 0 | |
| TrEMBL | Q53MM3 | Retrotransposon protein, putative, Ty1-copia sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g07980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 28 | gene-QYE76_000512, gene-QYE76_000878, gene-QYE76_001935 ... |