Basic Information
Locus ID:
gene-QYE76_049323
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter transmembrane region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 34705241 | 34718426 | + | gene-QYE76_049323 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 77,352.84 Da | 42.44 | 83.42 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 405 | 571 | 7.1E-42 | IPR013103 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 51 | 88 | 2.0E-6 | IPR029472 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 114 | 251 | 1.1E-12 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 377 | 611 | 2.67E-17 | IPR043502 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 297 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051201939.1 | uncharacterized protein LOC127315493 [Lolium perenne] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2N9EVH3 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6707 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |