Basic Information
Locus ID:
gene-QYE76_049156
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 28869446 | 28872246 | - | gene-QYE76_049156 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 33,053.83 Da | 50.68 | 72.07 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 181 | 298 | 3.94357E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 179 | 298 | 1.5E-21 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 158 | 297 | 4.45E-39 | IPR036404 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 73 | 106 | 1.77E-6 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 14 | 60 | 1.86E-5 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 156 | 299 | 2.3E-46 | IPR036404 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 71 | 2.4E-6 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 72 | 113 | 2.5E-7 | IPR013083 |
| SMART | SM00915 | Jacalin_2 | 170 | 299 | 3.0E-19 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 159 | 299 | 37.777359 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_051222718.1 | jacalin-related lectin 3-like [Lolium perenne] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | M7YV66 | Mannose/glucose-specific lectin OS=Triticum urartu OX=4572 GN=TRIUR3_09359 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology