Basic Information
Locus ID:
gene-QYE76_048878
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19604346 | 19628653 | + | gene-QYE76_048878 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 34,082.22 Da | 38.32 | 76.16 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 40 | 231 | 2.1E-37 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 38 | 232 | 3.08E-45 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 36 | 248 | 1.7E-47 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 160 | 166 | - | IPR019825 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07460.2 | - | 0 |
| RefSeq | XP_047057922.1 | L-type lectin-domain containing receptor kinase IX.2-like [Lolium rigidum] | 0 |
| P05087 | Leucoagglutinating phytohemagglutinin OS=Phaseolus vulgaris OX=3885 GN=DLEC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NJX9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH04.1995, BH04.2001, BH04.2004, BH04.2007, BH04.2008 |
| Poaceae | Hordeum vulgare | 8 | HORVU.MOREX.r3.2HG0097640.1, HORVU.MOREX.r3.2HG0097720.1 ... |
| Poaceae | Lolium multiflorum | 15 | gene-QYE76_004354, gene-QYE76_004356, gene-QYE76_004362 ... |
| Poaceae | Oryza coarctata | 2 | Oco08G000910, Oco08G000950 |
| Poaceae | Oryza sativa | 16 | LOC_Os04g03370.1, LOC_Os04g03380.1, LOC_Os04g03530.1 ... |
| Poaceae | Paspalum vaginatum | 10 | gene-BS78_K006300, gene-BS78_K006400, gene-BS78_K006500 ... |
| Poaceae | Puccinellia tenuiflora | 7 | Pt_Chr0300137, Pt_Chr0402868, Pt_Chr0500818, Pt_Chr0500820 ... |
| Poaceae | Thinopyrum elongatum | 7 | Tel1E01G056800, Tel2E01G048600, Tel2E01G048700 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG001630, gene_TRIDC2BG001740 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2B02G007400.2, TraesCS2B02G008400.1 ... |