Basic Information
Locus ID:
gene-QYE76_048723
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 14320414 | 14326566 | + | gene-QYE76_048723 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 151,417.36 Da | 44.28 | 96.18 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 58 | 136 | 2.1E-8 | IPR041118 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1055 | 1188 | 2.0E-13 | IPR001245 |
| Pfam | PF00931 | NB-ARC domain | 227 | 433 | 2.0E-40 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 214 | 479 | 2.12E-52 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1005 | 1284 | 4.07E-31 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 544 | 897 | 2.18E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1113 | 1191 | 7.7E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 996 | 1108 | 6.4E-18 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 464 | 556 | 2.9E-10 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 595 | 907 | 6.5E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1192 | 1292 | 1.6E-15 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 57 | 171 | 4.6E-13 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 211 | 369 | 1.0E-28 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 377 | 463 | 1.5E-9 | IPR042197 |
| SMART | SM00220 | serkin_6 | 1032 | 1288 | 1.4E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1034 | 1288 | 15.651299 | IPR000719 |
| PRINTS | PR00364 | Disease resistance protein signature | 244 | 259 | 1.3E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 667 | 683 | 1.3E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 316 | 330 | 1.3E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 413 | 427 | 1.3E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 969 | 987 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 987 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26290.1 | root-specific kinase 1. | 0 |
| RefSeq | XP_051206140.1 | disease resistance protein RGA5-like isoform X1 [Lolium perenne] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | M8CJX5 | Disease resistance protein RPP13 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH02.2484 |
| Poaceae | Hordeum vulgare | 8 | HORVU.MOREX.r3.5HG0534540.1, HORVU.MOREX.r3.6HG0550480.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_006977, gene-QYE76_048723, gene-QYE76_048728 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g22484.1 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205164, Pt_Chr0205206 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G1030200, Tel7E01G023300, Tel7E01G062300 |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC4AG067680, gene_TRIDC4AG068620 ... |
| Poaceae | Triticum aestivum | 22 | TraesCS1D02G381400.1, TraesCS2D02G511600.2 ... |