Basic Information
Locus ID:
gene-QYE76_048640
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 11383146 | 11392694 | + | gene-QYE76_048640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 144,642.70 Da | 38.92 | 84.67 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 925 | 1014 | 3.09356E-15 | - |
| Pfam | PF00646 | F-box domain | 51 | 81 | 4.5E-6 | IPR001810 |
| Pfam | PF00646 | F-box domain | 416 | 449 | 6.9E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 100 | 3.27E-9 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 410 | 456 | 4.97E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 49 | 87 | 6.3E-6 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 903 | 1036 | 1.8E-7 | IPR021109 |
| SMART | SM00256 | fbox_2 | 51 | 90 | 1.7E-5 | IPR001810 |
| SMART | SM00256 | fbox_2 | 411 | 452 | 1.5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 552 | 731 | 8.9E-15 | IPR017451 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 130 | 331 | 5.7E-24 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1196 | 1216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1198 | 1216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 47 | - | - |
| Coils | Coil | Coil | 788 | 808 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53790.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044429167.1 | uncharacterized protein LOC123154530 [Triticum aestivum] | 0 |
| Q0WQM8 | F-box protein At1g53790 OS=Arabidopsis thaliana OX=3702 GN=At1g53790 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SMH1 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 33 | gene-QYE76_000029, gene-QYE76_000961, gene-QYE76_010060 ... |