HalophFGD

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Basic Information
Locus ID: gene-QYE76_048592
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 7954836 7955979 - gene-QYE76_048592
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.74 38,180.00 Da 44.36 96.79 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 9 44 5.5E-8 IPR001810
SUPERFAMILY SSF50965 Galactose oxidase, central domain 74 305 1.96E-6 IPR011043
SUPERFAMILY SSF81383 F-box domain 8 77 2.62E-15 IPR036047
Gene3D G3DSA:1.20.1280.50 - 4 47 4.7E-9 -
SMART SM00256 fbox_2 10 50 5.7E-8 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 4 49 9.470975 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G31080.1 F-box family protein. 0
RefSeq XP_051196517.1 putative F-box protein At2g02030 [Lolium perenne] 0
Swiss-Prot Q9SA02 F-box protein At1g31080 OS=Arabidopsis thaliana OX=3702 GN=At1g31080 PE=2 SV=1 0
TrEMBL A0A3B6GR74 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 1 pistato.v30291420
Arecaceae Phoenix dactylifera 1 gene-LOC103701671
Brassicaceae Arabidopsis thaliana 1 AT2G41473.1
Plantaginaceae Plantago ovata 2 Pov_00037827, Pov_00038433
Poaceae Echinochloa crus-galli 48 AH01.2189, AH01.2195, AH03.3555, AH03.520, AH03.521 ...
AH03.534, AH03.621, AH03.771, AH03.772, AH03.774, AH03.778, AH04.2085, AH04.865, AH06.2538, AH07.2230, BH01.2859, BH03.614, BH03.641, BH03.687, BH03.899, BH03.903, BH04.831, BH04.832, BH04.833, BH05.3670, BH05.609, BH06.2338, BH06.2339, BH06.2340, BH07.2292, CH02.2815, CH03.1011, CH03.1012, CH03.1013, CH03.1016, CH03.4058, CH03.699, CH03.706, CH03.710, CH03.719, CH04.2492, CH04.839, CH05.708, CH06.2562, CH06.2563, CH06.2564, CH07.107, CH07.2367
Poaceae Eleusine coracana subsp. coracana 28 gene-QOZ80_2AG0108440, gene-QOZ80_2AG0132200 ...
gene-QOZ80_2AG0132210, gene-QOZ80_2BG0162070, gene-QOZ80_2BG0162080, gene-QOZ80_2BG0187660, gene-QOZ80_5AG0387550, gene-QOZ80_5AG0388340, gene-QOZ80_5AG0398950, gene-QOZ80_5BG0447660, gene-QOZ80_6AG0547090, gene-QOZ80_7AG0559540, gene-QOZ80_7AG0559690, gene-QOZ80_7AG0559710, gene-QOZ80_7AG0559930, gene-QOZ80_7AG0562450, gene-QOZ80_7AG0562470, gene-QOZ80_7AG0562480, gene-QOZ80_7BG0590880, gene-QOZ80_7BG0590920, gene-QOZ80_7BG0590940, gene-QOZ80_7BG0590980, gene-QOZ80_7BG0591120, gene-QOZ80_7BG0591160, gene-QOZ80_7BG0591210, gene-QOZ80_8AG0629740, gene-QOZ80_8BG0658620, gene-QOZ80_8BG0658660
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.3HG0234450.1, HORVU.MOREX.r3.3HG0246530.1 ...
HORVU.MOREX.r3.6HG0548950.1.CDS1, HORVU.MOREX.r3.6HG0548980.1.CDS1, HORVU.MOREX.r3.6HG0560200.1.CDS1, HORVU.MOREX.r3.6HG0567110.1, HORVU.MOREX.r3.6HG0567120.1.CDS1, HORVU.MOREX.r3.7HG0739630.1.CDS1, HORVU.MOREX.r3.7HG0739810.1.CDS1
Poaceae Lolium multiflorum 71 gene-QYE76_003164, gene-QYE76_003165, gene-QYE76_003228 ...
gene-QYE76_003229, gene-QYE76_005940, gene-QYE76_006449, gene-QYE76_007425, gene-QYE76_007426, gene-QYE76_007427, gene-QYE76_009917, gene-QYE76_009927, gene-QYE76_016247, gene-QYE76_018810, gene-QYE76_019790, gene-QYE76_019793, gene-QYE76_019795, gene-QYE76_019800, gene-QYE76_019809, gene-QYE76_019946, gene-QYE76_020019, gene-QYE76_024117, gene-QYE76_024384, gene-QYE76_026658, gene-QYE76_026823, gene-QYE76_030422, gene-QYE76_034567, gene-QYE76_036437, gene-QYE76_036439, gene-QYE76_036444, gene-QYE76_036446, gene-QYE76_036448, gene-QYE76_036449, gene-QYE76_036450, gene-QYE76_036452, gene-QYE76_036457, gene-QYE76_036458, gene-QYE76_037638, gene-QYE76_042937, gene-QYE76_046918, gene-QYE76_047312, gene-QYE76_048592, gene-QYE76_048596, gene-QYE76_049145, gene-QYE76_049286, gene-QYE76_049621, gene-QYE76_055065, gene-QYE76_055931, gene-QYE76_056377, gene-QYE76_057543, gene-QYE76_057544, gene-QYE76_059520, gene-QYE76_059840, gene-QYE76_060017, gene-QYE76_060018, gene-QYE76_060020, gene-QYE76_060365, gene-QYE76_060370, gene-QYE76_062142, gene-QYE76_062143, gene-QYE76_062144, gene-QYE76_062145, gene-QYE76_062171, gene-QYE76_062172, gene-QYE76_062173, gene-QYE76_062174, gene-QYE76_064526, gene-QYE76_067456, gene-QYE76_067457, gene-QYE76_067460, gene-QYE76_067461, gene-QYE76_069926
Poaceae Oryza coarctata 16 Oco01G012120, Oco13G003280, Oco13G003300, Oco13G003340 ...
Oco13G004400, Oco14G003120, Oco14G003130, Oco14G003580, Oco14G003600, Oco14G003610, Oco14G003630, Oco14G003650, Oco14G003680, Oco14G003720, Oco14G005030, Oco23G005920
Poaceae Oryza sativa 12 LOC_Os05g49530.1, LOC_Os07g08570.1, LOC_Os07g08850.1 ...
LOC_Os07g09710.1, LOC_Os07g09750.1, LOC_Os07g09814.2, LOC_Os07g09870.1, LOC_Os07g09880.1, LOC_Os07g09950.1, LOC_Os07g10710.1, LOC_Os07g13870.1, LOC_Os07g13890.1
Poaceae Paspalum vaginatum 14 gene-BS78_01G479600, gene-BS78_02G068700 ...
gene-BS78_02G068800, gene-BS78_02G069400, gene-BS78_02G069500, gene-BS78_02G069600, gene-BS78_02G071200, gene-BS78_02G115600, gene-BS78_02G115700, gene-BS78_03G143400, gene-BS78_04G146000, gene-BS78_05G105300, gene-BS78_05G105400, gene-BS78_10G214800
Poaceae Puccinellia tenuiflora 20 Pt_Chr0103507, Pt_Chr0103508, Pt_Chr0103509, Pt_Chr0103511 ...
Pt_Chr0202703, Pt_Chr0207151, Pt_Chr0303772, Pt_Chr0303775, Pt_Chr0303796, Pt_Chr0303804, Pt_Chr0400012, Pt_Chr0401397, Pt_Chr0401398, Pt_Chr0401399, Pt_Chr0401403, Pt_Chr0401413, Pt_Chr0401414, Pt_Chr0401416, Pt_Chr0401418, Pt_Chr0600836
Poaceae Sporobolus alterniflorus 16 Chr06G011030, Chr15G012580, Chr20G006450, Chr24G003140 ...
Chr24G003150, Chr24G003180, Chr24G003190, Chr24G003460, Chr24G004840, Chr26G001660, Chr28G002610, Chr28G002620, Chr28G002720, Chr28G004160, Chr28G005940, Chr29G006070
Poaceae Thinopyrum elongatum 14 Tel3E01G139700, Tel3E01G139900, Tel5E01G518300 ...
Tel5E01G519000, Tel5E01G519200, Tel5E01G519300, Tel5E01G828800, Tel6E01G160400, Tel6E01G163000, Tel6E01G273200, Tel6E01G295000, Tel6E01G295100, Tel7E01G754500, Tel7E01G842700
Poaceae Triticum dicoccoides 9 gene_TRIDC2AG077760, gene_TRIDC2BG075100 ...
gene_TRIDC3BG012920, gene_TRIDC3BG015590, gene_TRIDC3BG024110, gene_TRIDC5BG052180, gene_TRIDC6AG019220, gene_TRIDC6BG012510, gene_TRIDC6BG025200
Poaceae Triticum aestivum 49 TraesCS2B02G520400.1, TraesCS2D02G060700.1.cds1 ...
TraesCS2D02G492500.1, TraesCS2D02G520600.1.cds1, TraesCS2D02G556400.1.cds1, TraesCS3A02G096100.1.cds1, TraesCS3A02G135000.1, TraesCS3B02G091600.1.cds1, TraesCS3B02G111900.1.cds1, TraesCS3B02G168800.1, TraesCS3D02G079500.1.cds1, TraesCS3D02G096600.1.cds1, TraesCS3D02G151000.1, TraesCS5A02G326000.1.cds1, TraesCS5A02G326400.1.cds1, TraesCS5A02G326500.1.cds1, TraesCS5A02G326600.1.cds1, TraesCS5B02G326700.1.cds1, TraesCS5B02G326800.1.cds1, TraesCS5B02G326900.1.cds1, TraesCS5B02G327000.1.cds1, TraesCS5B02G327100.1.cds1, TraesCS5B02G534500.1.cds1, TraesCS5D02G332500.1.cds1, TraesCS5D02G332600.1.cds1, TraesCS5D02G332700.1.cds1, TraesCS5D02G332800.1.cds1, TraesCS5D02G332900.1.cds1, TraesCS5D02G333000.1.cds1, TraesCS6A02G066600.1.cds1, TraesCS6A02G140600.1, TraesCS6A02G140700.1, TraesCS6B02G089800.1.cds1, TraesCS6D02G065800.1.cds1, TraesCS6D02G066000.1.cds1, TraesCS6D02G128300.1, TraesCS6D02G130000.1, TraesCS6D02G130100.1, TraesCS7A02G492200.1, TraesCS7A02G493200.1.cds1, TraesCS7B02G397900.1.cds1, TraesCS7B02G398200.1.cds1, TraesCS7B02G399000.1.cds1, TraesCS7B02G399100.1.cds1, TraesCS7B02G399200.1.cds1, TraesCS7D02G478200.1.cds1, TraesCSU02G049800.1.cds1, TraesCSU02G076800.1.cds1, TraesCSU02G117500.1.cds1
Poaceae Zea mays 3 Zm00001eb325430_P001, Zm00001eb407470_P001 ...
Zm00001eb407480_P003
Poaceae Zoysia japonica 9 nbis-gene-26706, nbis-gene-26708, nbis-gene-26714 ...
nbis-gene-35574, nbis-gene-35576, nbis-gene-35580, nbis-gene-38811, nbis-gene-52763, nbis-gene-55664
Poaceae Zoysia macrostachya 8 Zma_g4874, Zma_g4879, Zma_g4880, Zma_g6151, Zma_g6152 ...
Zma_g6153, Zma_g6154, Zma_g6252
Solanaceae Lycium barbarum 2 gene-LOC132610451, gene-LOC132613453
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.