Basic Information
Locus ID:
gene-QYE76_048550
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 6551821 | 6555475 | - | gene-QYE76_048550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 61,220.25 Da | 40.05 | 83.76 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 141 | 4.26354E-13 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 398 | 492 | 4.1E-9 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 201 | 295 | 3.1E-9 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 161 | 8.18E-24 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 201 | 295 | 3.14E-12 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 395 | 491 | 1.55E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 299 | 377 | 1.4E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 191 | 298 | 7.2E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 383 | 494 | 3.4E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 495 | 560 | 4.8E-13 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 161 | 2.7E-22 | IPR008974 |
| SMART | SM00225 | BTB_4 | 199 | 298 | 9.5E-9 | IPR000210 |
| SMART | SM00225 | BTB_4 | 396 | 495 | 2.3E-9 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 158 | 15.149195 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 197 | 253 | 10.219954 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 394 | 450 | 10.240635 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051208379.1 | BTB/POZ and MATH domain-containing protein 3-like [Lolium perenne] | 0 |
| TrEMBL | A0A3B6GM81 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-QYE76_048550.