Basic Information
Locus ID:
gene-QYE76_048311
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_1195 | 14589 | 17390 | - | gene-QYE76_048311 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 87,402.69 Da | 40.67 | 71.10 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04937 | Protein of unknown function (DUF 659) | 275 | 426 | 4.1E-44 | IPR007021 |
| Pfam | PF05699 | hAT family C-terminal dimerisation region | 643 | 716 | 1.3E-4 | IPR008906 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 299 | 719 | 2.5E-37 | IPR012337 |
| ProSiteProfiles | PS50808 | Zinc finger BED-type profile. | 38 | 88 | 9.607907 | IPR003656 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 185 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17450.1 | hAT dimerisation domain-containing protein. | 0 |
| RefSeq | XP_051227163.1 | uncharacterized protein LOC127344855 [Lolium perenne] | 0 |
| TrEMBL | A0A8T0T8G3 | BED-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG292738 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | BH01.4753, BH06.686, BH08.2468, BH08.2472, CH05.2087 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1BG0056120, gene-QOZ80_4BG0351070 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_048311, gene-QYE76_055843 |
| Poaceae | Paspalum vaginatum | 15 | gene-BS78_03G023900, gene-BS78_03G199100, gene-BS78_K224500 ... |
| Poaceae | Sporobolus alterniflorus | 11 | Chr03G013220, Chr03G013230, Chr03G013240, Chr05G004880 ... |