Basic Information
Locus ID:
gene-QYE76_047778
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 330004611 | 330005831 | - | gene-QYE76_047778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 45,855.89 Da | 45.47 | 86.65 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 55 | 184 | 1.48778E-24 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 207 | 319 | 3.21093E-44 | - |
| Pfam | PF00651 | BTB/POZ domain | 208 | 322 | 6.8E-29 | IPR000210 |
| Pfam | PF00917 | MATH domain | 79 | 184 | 2.4E-4 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 195 | 321 | 1.55E-34 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 53 | 188 | 4.25E-29 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 187 | 324 | 7.0E-38 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 53 | 186 | 2.7E-24 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 325 | 397 | 6.5E-17 | - |
| SMART | SM00225 | BTB_4 | 218 | 323 | 9.2E-27 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 54 | 183 | 18.882341 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 218 | 285 | 19.195942 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_051211909.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D5UIL5 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS4171 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_047778, gene-QYE76_047782, gene-QYE76_047783 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0301190 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G104900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG027710 |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G418000.1.cds1, TraesCS2A02G418100.1.cds1 ... |