Basic Information
Locus ID:
gene-QYE76_047560
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 324315458 | 324320418 | - | gene-QYE76_047560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 86,579.80 Da | 56.23 | 66.15 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 316 | 645 | 7.45649E-38 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 607 | 644 | 0.012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 432 | 468 | 6.5E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 473 | 510 | 1.6E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 319 | 351 | 1.1E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 313 | 648 | 6.64E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 273 | 373 | 8.6E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 413 | 687 | 2.2E-48 | IPR015943 |
| SMART | SM00320 | WD40_4 | 471 | 510 | 1.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 352 | 1.4E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 563 | 603 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 512 | 551 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 604 | 645 | 0.0077 | IPR001680 |
| SMART | SM00320 | WD40_4 | 430 | 468 | 1.5E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 320 | 356 | 11.471045 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 477 | 512 | 10.469233 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 437 | 477 | 14.518635 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 320 | 361 | 14.184453 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 477 | 512 | 12.580379 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 437 | 469 | 11.075592 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 455 | 469 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 339 | 353 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 455 | 469 | 1.1E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 497 | 511 | 1.1E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 339 | 353 | 1.1E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 690 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 721 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_051219966.1 | uncharacterized protein LOC127337124 [Lolium perenne] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I7B8G3 | WD_REPEATS_REGION domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology