Basic Information
Locus ID:
gene-QYE76_047548
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 323940358 | 323949979 | + | gene-QYE76_047548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 187,143.05 Da | 55.09 | 77.53 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 1453 | 1571 | 7.06275E-30 | IPR000608 |
| CDD | cd00195 | UBCc | 734 | 852 | 8.79458E-31 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 1455 | 1578 | 4.3E-22 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 736 | 857 | 1.9E-22 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1434 | 1617 | 3.28E-35 | IPR016135 |
| SUPERFAMILY | SSF54495 | UBC-like | 723 | 898 | 1.7E-35 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1413 | 1683 | 2.1E-70 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 690 | 916 | 4.3E-68 | IPR016135 |
| SMART | SM00212 | ubc_7 | 1453 | 1633 | 1.3E-16 | - |
| SMART | SM00212 | ubc_7 | 734 | 895 | 4.5E-15 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 731 | 891 | 31.041298 | IPR000608 |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1450 | 1610 | 29.513706 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1148 | 1275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1032 | 1095 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1193 | 1215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 986 | 1016 | - | - |
| Coils | Coil | Coil | 293 | 320 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16920.1 | ubiquitin-conjugating enzyme 23. | 0 |
| RefSeq | XP_051219993.1 | probable ubiquitin-conjugating enzyme E2 23 [Lolium perenne] | 0 |
| Q9ZVX1 | Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana OX=3702 GN=UBC23 PE=1 SV=1 | 0 | |
| TrEMBL | M8C7U4 | Putative ubiquitin carrier protein E2 23 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH05.3665 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0210000.1, HORVU.MOREX.r3.3HG0223690.1 |
| Poaceae | Lolium multiflorum | 11 | gene-QYE76_008216, gene-QYE76_026496, gene-QYE76_047469 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os05g06120.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0203400 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G971600, Tel3E01G051900 |
| Poaceae | Triticum aestivum | 17 | TraesCS2A02G403400.1, TraesCS2A02G586300.1 ... |