Basic Information
Locus ID:
gene-QYE76_047476
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
flocculation via cell wall protein-carbohydrate interaction
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 321454760 | 321460437 | + | gene-QYE76_047476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 60,454.22 Da | 56.20 | 61.41 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 540 | - | - |
| Coils | Coil | Coil | 138 | 158 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051186829.1 | uncharacterized protein LOC127300712 [Lolium perenne] | 0 |
| TrEMBL | Q7XVH2 | OSJNBa0016N04.4 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0016N04.4 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |