Basic Information
Locus ID:
gene-QYE76_047462
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 320935359 | 320938833 | - | gene-QYE76_047462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 55,636.27 Da | 46.34 | 66.54 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 37 | 170 | 3.1E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 212 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051201939.1 | uncharacterized protein LOC127315493 [Lolium perenne] | 0 |
| TrEMBL | M8BVQ9 | Putative receptor protein kinase ZmPK1 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |